Function reference

All functions

Seurat5obj_to_SpaTopic()

Convert a Seurat v5 object as the input of 'SpaTopic'

SpaTopic SpaTopic-package SpaTopic-Package

'SpaTopic' R package

SpaTopic_inference()

'SpaTopic': fast topic inference to identify tissue architecture in multiplexed images

gibbs.res-class

A class of the output from 'SpaTopic'

lung5

Example input data for 'SpaTopic'

stratified_sampling_sf()

Spatially stratified random sample points from an image.